The detailed information of tRNA gene sequence


Sequence ID>W2011021436
Genome IDNPEX01000080
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodoplanes roseus DSM 5909 [NPEX]
Start position on genome 14374
End posion on genome 14448
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gccgccgcct
tRNA gene sequence 
TGGGGCGTAGCCAAGTGGTAAGGCAGCGGATTTTGATTCCGCCATTCCCTGGTTCGAATC
CAGGCGCCCCAGCCA
Downstream region at tRNA end position 
agcctgcacg
Secondary structure (Cloverleaf model)
>W2011021436	Gln	TTG
                   t      GCCA agcctgcacg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G G A C C     A
        G A        A      | | | | |     G
      T     A C C G       C C T G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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