The detailed information of tRNA gene sequence


Sequence ID>SRA1040788
Genome IDSRR035091.150227
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 179
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtaattgtt
tRNA gene sequence 
GCTGATGTAGCTCAGTCGGTTAGAGCGGGCGTTTCATAAGCGCCAGGTCGCTGGTTCAAG
TCCAGCCATCAGCACtc
Downstream region at tRNA end position 
gcgattgaaa
Secondary structure (Cloverleaf model)
>SRA1040788	Met	CAT
                   t      ACtc gcgattgaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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