The detailed information of tRNA gene sequence


Sequence ID>W2011023591
Genome IDNPHZ01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Trichoplax sp. H2 [NPHZ]
Start position on genome 200195
End posion on genome 200119
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atttattaat
tRNA gene sequence 
GGGTTTGTAGCTCAGCTGGTTAGAGTGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAA
TCCACCCAGACCCACCA
Downstream region at tRNA end position 
ttagatcaaa
Secondary structure (Cloverleaf model)
>W2011023591	Ile	GAT
                   t      ACCA ttagatcaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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