The detailed information of tRNA gene sequence


Sequence ID>SRA1040834
Genome IDSRR035091.157883
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 291
End posion on genome 204
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaacagagc
tRNA gene sequence 
GGAGGGATGCCAGAGCGGTTTAATGGGACAGTCTTGAAAACTGTTGTTCGTTTACGCGAA
CCGTGAGTTCGAATCTCACTCCCTCCGCtc
Downstream region at tRNA end position 
tgacgcgggg
Secondary structure (Cloverleaf model)
>SRA1040834	Ser	TGA
                   c      GCtc tgacgcgggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGTTCGTTTACGCGAACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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