The detailed information of tRNA gene sequence


Sequence ID>SRA1040840
Genome IDSRR035091.158635
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 171
End posion on genome 246
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcaaatat
tRNA gene sequence 
AGCGGAGTAGAGTAAAGGTTACTCGTCAGCCTCATAAGCTGGAATAATGCTGGTTCGAAT
CCAGTCTCCGCAACCA
Downstream region at tRNA end position 
gccagtgtag
Secondary structure (Cloverleaf model)
>SRA1040840	Met	CAT
                   t      ACCA gccagtgtag
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G A C C     A
        A A        A      + | | | |     G
      A     T G A G       G C T G G     C
      G     | | | |                 T T
      G     A C T C
        T T        G     AATAAT
                    T + G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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