The detailed information of tRNA gene sequence


Sequence ID>W2011045020
Genome IDNQWI01000002
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Viridilinea mediisalina Kir15-3F [NQWI]
Start position on genome 2712
End posion on genome 2618
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcaccact
tRNA gene sequence 
GAGAGCGGATGTAGCCGGGTGGCTGCCTTGGTCTTCAAAACCAAAGAGCGCGGTGACGAG
CCGCGTTGGTGGGTTCGACTCCCACGCGCTCTCGCgg
Downstream region at tRNA end position 
ttgatggatt
Secondary structure (Cloverleaf model)
>W2011045020	SeC	TCA
                   t      GCgg ttgatggatt
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    A     C A C C C     A
      G C C        T      | | | | |     G
    G       G A T G       G T G G G     C
    G       | | + |                 T T
    T       C T G C
      G G          C     AGAGCGCGGTGACGAGCCGCGTTG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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