The detailed information of tRNA gene sequence


Sequence ID>SRA1041043
Genome IDSRR035091.186692
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 159
End posion on genome 246
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaggtgatag
tRNA gene sequence 
GGAGGAGTCGCATAGCGGCCTAGTGTCCGCGCTTGGAAAGCGCTGGGGGATGAAAGTCCC
ACGTGGGTTCGAATCCCACCTCCTCCGCtt
Downstream region at tRNA end position 
aaaaatgaac
Secondary structure (Cloverleaf model)
>SRA1041043	Ser	GGA
                   g      GCtt aaaaatgaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | +                 T T
    C       G T G T
      C T A        C     GGGGGATGAAAGTCCCAC
                    C   T
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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