The detailed information of tRNA gene sequence


Sequence ID>SRA1041170
Genome IDSRR035091.207825
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 144
End posion on genome 55
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatgaattaa
tRNA gene sequence 
GGAGAGATGCCAGAGTCTGGTTTATCGGGGCCGCCTCGAAAGCGGTTGTGCCATAAGGTA
CCGGGGGTTCGAATCCTCCTCTCTCCGCCA
Downstream region at tRNA end position 
gcgttatttg
Secondary structure (Cloverleaf model)
>SRA1041170	Ser	CGA
                   a      GCCA gcgttatttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C T C C     A
    C T G A        G      | | + | |     G
  T         G A C C       G G G G G     C
  G         +   | |                 T T
  G         T C G G
    T T T A        G     TGTGCCATAAGGTACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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