The detailed information of tRNA gene sequence


Sequence ID>SRA1041183
Genome IDSRR035091.209782
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 353
End posion on genome 264
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aggatataat
tRNA gene sequence 
GGAGGCGTGGCAGAGTGGTTGAATGCACCACATTCGAAATGTGGCAGGCCTTAACGGGTC
TCAGGGGTTCAAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
tcgcttcgct
Secondary structure (Cloverleaf model)
>SRA1041183	Ser	CGA
                   t      GCCA tcgcttcgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | + | |     A
    G       G A C G       A G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAGGCCTTAACGGGTCTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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