The detailed information of tRNA gene sequence


Sequence ID>SRA1041360
Genome IDSRR035091.232590
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 97
End posion on genome 8
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgtaccac
tRNA gene sequence 
GGAGAGTTGCCCGAGATAGGACTAAGGGGCTCGCCTGCTAAGCGATGCGGTGTAAAAACC
ACGAGGGTTCAAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttttgtgnnn
Secondary structure (Cloverleaf model)
>SRA1041360	Ser	GCT
                   c      GCCA ttttgtgnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     A
  A         G C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    A C T A        G     GCGGTGTAAAAACCAC
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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