The detailed information of tRNA gene sequence


Sequence ID>SRA1041431
Genome IDSRR035091.240974
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 281
End posion on genome 188
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tatagtacat
tRNA gene sequence 
GCCCTGATAGTGTAACGGTAACACACCCGGCTTATACCCGGCATAGTCTCCAGATTAGAG
AGCATTACAGGTTCGAATCCTGTTCGGGGTACCA
Downstream region at tRNA end position 
cacaaaaata
Secondary structure (Cloverleaf model)
>SRA1041431	Ile	TAT
                   t      ACCA cacaaaaata
                     G + T
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     A - T          T A
                    T     T G T C C     A
        A A        A      | | | | |     G
      C     T G T G       A C A G G     C
      G     | | | |                 T T
      G     A C A C
        T A        A     ATAGTCTCCAGATTAGAGAGCATT
                    C   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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