The detailed information of tRNA gene sequence


Sequence ID>SRA1041449
Genome IDSRR035091.243211
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 260
End posion on genome 171
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggcgccat
tRNA gene sequence 
GGAAATATACCCAAGAGGCTGAAGGGACGGGTTGCTAACTCGTTAGGTCGTTTCGACGGC
GCGCAGGTTCGAATCCTGCTGTTTCCGCCA
Downstream region at tRNA end position 
attaataatt
Secondary structure (Cloverleaf model)
>SRA1041449	Ser	GCT
                   t      GCCA attaataatt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T + G
                     A - T          T A
                    T     C G T C C     A
      A G A        A      | | | | |     G
    G       A C C C       G C A G G     C
    G           | |                 T T
    C       A A G G
      T G          G     TAGGTCGTTTCGACGGCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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