The detailed information of tRNA gene sequence


Sequence ID>SRA1041487
Genome IDSRR035091.248866
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 164
End posion on genome 72
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttttaggc
tRNA gene sequence 
GGAGAGGTGCCCGAGAGGCCGAAGGGAACGGTTTGCTAAACCGTCGTAGGGTGTAAAGCT
TTACCGAGAGTTCGAATCTCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttaatctt
Secondary structure (Cloverleaf model)
>SRA1041487	Ser	GCT
                   c      GCCA ttttaatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGTAGGGTGTAAAGCTTTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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