The detailed information of tRNA gene sequence


Sequence ID>SRA1041538
Genome IDSRR035091.257805
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 199
End posion on genome 283
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcaagcatta
tRNA gene sequence 
GCCACGGTGGCGGAACCGGTAGACGCGTAGGTCTCAAAAACCTNTGAGGGCAACCTCGTG
AGAGTTCGATTCTCTCCCGTGGCACtt
Downstream region at tRNA end position 
ttatttcaat
Secondary structure (Cloverleaf model)
>SRA1041538	Leu	CAA
                   a      ACtt ttatttcaat
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T T
                    T     C T C T C     A
      C A A        G      | | | | |     G
    C       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGAGGGCAACCTCGT
                    T   N
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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