The detailed information of tRNA gene sequence


Sequence ID>SRA1041639
Genome IDSRR035091.272533
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 381
End posion on genome 311
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcccgcttta
tRNA gene sequence 
GGAAATGTAATGTAACGGTAACATGGCGGACTCCAGACCCGTCTTTACGGGTTCGAATCC
TGTCATTTCCAtgg
Downstream region at tRNA end position 
ggtgatataa
Secondary structure (Cloverleaf model)
>SRA1041639	Trp	CCA
                   a      Atgg ggtgatataa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
        A A        A      | | + | |     G
      C     T G T A       A C G G G     C
      G     | | | |                 T T
      G     A C A T
        T A        G     CTTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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