The detailed information of tRNA gene sequence


Sequence ID>SRA1042049
Genome IDSRR035091.332560
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 303
End posion on genome 392
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tataataaag
tRNA gene sequence 
GGAGAGTTGCCAGAGTGGTTTAATGGGGTGCTCTCGAAAAGCATTAGTCTATTTTTAGAC
TCGGGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
aaaacgaatc
Secondary structure (Cloverleaf model)
>SRA1042049	Ser	CGA
                   g      GCCA aaaacgaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TAGTCTATTTTTAGACTC
                    G + T
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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