The detailed information of tRNA gene sequence


Sequence ID>SRA1042116
Genome IDSRR035091.341049
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 149
End posion on genome 235
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaatatatT
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGCTTGCTTGGAGTGCAAGTATACCGCAAGGTATC
GGGAGTTCGAATCTCCCCCTCTCCGAtt
Downstream region at tRNA end position 
ttaaaaacaa
Secondary structure (Cloverleaf model)
>SRA1042116	Ser	GGA
                   T      GAtt ttaaaaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G A G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATACCGCAAGGTATC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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