The detailed information of tRNA gene sequence


Sequence ID>SRA1042127
Genome IDSRR035091.342857
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 115
End posion on genome 42
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcatgtctta
tRNA gene sequence 
GGGGGTGTCGTTCAGTGGTAGGACAGCGGTCTCCAAAACCGCTAACGAGGGTTCGATTCC
TTCCACCCCTGCAA
Downstream region at tRNA end position 
aatagcctca
Secondary structure (Cloverleaf model)
>SRA1042127	Trp	CCA
                   a      GCAA aatagcctca
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T T C C     A
        G A        C      | | + | |     G
      T     C T T G       G A G G G     C
      G     | + | |                 T T
      G     G G A C
        T A        A     TAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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