The detailed information of tRNA gene sequence


Sequence ID>SRA1042143
Genome IDSRR035091.344867
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 149
End posion on genome 79
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcaagtcaa
tRNA gene sequence 
GGGCCCATAGTCTAGTGGTAGAATACTTCCCTTGCACGGAAGAGGTCCGTGTTCGATTCA
CGGTGGGTCCAttt
Downstream region at tRNA end position 
aaattttttc
Secondary structure (Cloverleaf model)
>SRA1042143	Ala	TGC
                   a      Attt aaattttttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G C A C     A
        G A        A      | | | | |     G
      T     T C T G       C C G T G     C
      G     +   | +                 T T
      G     G A A T
        T A        A     AGGT
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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