The detailed information of tRNA gene sequence


Sequence ID>SRA1042145
Genome IDSRR035091.345554
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 307
End posion on genome 213
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataaaaaac
tRNA gene sequence 
GGAAGGGTGGCTGAGAGGCTGAAAGCGGCAGTTTGCTAAACTGTTATACGTCTTTTATGG
GCGTATCGAGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ttcgcctccg
Secondary structure (Cloverleaf model)
>SRA1042145	Ser	GCT
                   c      GCCA ttcgcctccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGTCTTTTATGGGCGTATC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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