The detailed information of tRNA gene sequence


Sequence ID>SRA1042165
Genome IDSRR035091.348700
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 172
End posion on genome 85
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaaaataca
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAAGCAGCACACTGCTAATGTGCTGACCTCGCAAGGGGT
CCCAGGGTTCGAATCCCTGTCTCTCCGCat
Downstream region at tRNA end position 
tcggttcgcc
Secondary structure (Cloverleaf model)
>SRA1042165	Ser	GCT
                   a      GCat tcggttcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        A     TGACCTCGCAAGGGGTCC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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