The detailed information of tRNA gene sequence


Sequence ID>W2011158173
Genome IDOCNH01000001
Search identical group
Phylum/ClassBacteroidota
SpeciesSpirosoma fluviale DSM 29961 [OCNH]
Start position on genome 2141588
End posion on genome 2141501
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttcgttttt
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATGCGGGTAACCGTA
TCGAGAGTTCGAATCTCTTCCTCTCTGCat
Downstream region at tRNA end position 
tgaagtctgc
Secondary structure (Cloverleaf model)
>W2011158173	Ser	GGA
                   t      GCat tgaagtctgc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGCGGGTAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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