The detailed information of tRNA gene sequence


Sequence ID>W2011158449
Genome IDOCPC01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHoeflea halophila KCTC 23107 [OCPC]
Start position on genome 353166
End posion on genome 353090
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctgcgagcgt
tRNA gene sequence 
GCGATTGTAGCTCAGTTGGTTAGAGCGCCGGATTGTGGATCCGGAGGTCGGTGGTTCGAG
CCCACCCAATCGTACCA
Downstream region at tRNA end position 
ttcctctcct
Secondary structure (Cloverleaf model)
>W2011158449	His	GTG
                   t      ACCA ttcctctcct
                     G + T
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A
                     G - C          C G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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