The detailed information of tRNA gene sequence


Sequence ID>SRA1042216
Genome IDSRR035091.357327
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 192
End posion on genome 265
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatgtttatt
tRNA gene sequence 
GGGCCCATAGTATAGTGGTAAAACACCTCCATGGCATGGAGGAATCGGGAGTTCGACTCT
CCCTGGGTCCACCA
Downstream region at tRNA end position 
ttttgggcac
Secondary structure (Cloverleaf model)
>SRA1042216	Ala	GGC
                   t      ACCA ttttgggcac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T A T G       G G G A G     C
      G     |   | |                 T T
      G     A A A C
        T A        A     AATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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