The detailed information of tRNA gene sequence


Sequence ID>SRA1042235
Genome IDSRR035091.360040
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 78
End posion on genome 2
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgatggtct
tRNA gene sequence 
GGCAGGGTAGCTCAGTTGGTTAGAGCGATCGGATCATAACCGATAGGTCGCGGGTTCGAG
CCCCGCTCCTGCTACTA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1042235	Met	CAT
                   t      ACTA gnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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