The detailed information of tRNA gene sequence


Sequence ID>SRA1042263
Genome IDSRR035091.364364
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 108
End posion on genome 197
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttttttac
tRNA gene sequence 
GGAGAGATGCCAGAGCGGCCGAATGGGGCACCCTGCTAAGGTGTTAGGCTTTAACGGGCC
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aacacacttt
Secondary structure (Cloverleaf model)
>SRA1042263	Ser	GCT
                   c      GCCA aacacacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TAGGCTTTAACGGGCCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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