The detailed information of tRNA gene sequence


Sequence ID>SRA1042288
Genome IDSRR035091.367748
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 157
End posion on genome 85
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgcccataa
tRNA gene sequence 
GGGGTTATGGTGTAACTTGGCAGCATGGCTGGCTCCAAACCAGCAGATTTCGGTTCAAAT
CCGAATAACCCCAtac
Downstream region at tRNA end position 
gggattatag
Secondary structure (Cloverleaf model)
>SRA1042288	Trp	CCA
                   a      Atac gggattatag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T          T A
                    T     A A G C C     A
      C A A        G      | | | | |     A
    T       T G T G       T T C G G     C
    T       + | | +                 T T
    G       G C A T
      G C A        G     AGAT
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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