The detailed information of tRNA gene sequence


Sequence ID>SRA1042393
Genome IDSRR035091.381122
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 188
End posion on genome 111
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attcaagtaa
tRNA gene sequence 
GCGCCCGTCGTATAGTCCGGTTTTGTACAGGAGCCTGCATAGTTCTTAACGCTGGTTCAA
ATCCAGCCGGGCGCTCCA
Downstream region at tRNA end position 
aaaatgaaag
Secondary structure (Cloverleaf model)
>SRA1042393	Cys	GCA
                   a      TCCA aaaatgaaag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
    C T G A        C      | | | | |     A
  C         T A T G       G C T G G     C
  G         + | | |                 T T
  G         G T A C
    T T T T        A     TAAC
                    G + T
                    G - C
                    A - T
                    G + T
                    C - G
                  C       A
                  T       T
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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