The detailed information of tRNA gene sequence


Sequence ID>W2011200600
Genome IDPNCS01000020
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas sp. S4389 [PNCS]
Start position on genome 10132
End posion on genome 10205
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatctaattt
tRNA gene sequence 
GGCGGAATGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTCCACCTCGGTTCGACTCC
GGGTTCCGCCTCCA
Downstream region at tRNA end position 
ttcaacactc
Secondary structure (Cloverleaf model)
>W2011200600	Cys	GCA
                   t      TCCA ttcaacactc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     CCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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