The detailed information of tRNA gene sequence


Sequence ID>SRA1042854
Genome IDSRR035091.456188
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 201
End posion on genome 114
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaagcacccc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGTGGCGGTCTCGAAAACCGTTGTGCGCGCAAGTGCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCag
Downstream region at tRNA end position 
acaaaacaaa
Secondary structure (Cloverleaf model)
>SRA1042854	Ser	CGA
                   c      GCag acaaaacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        G     TGTGCGCGCAAGTGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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