The detailed information of tRNA gene sequence


Sequence ID>W2011230163
Genome IDPVWO01000054
Search identical group
Phylum/ClassCyanobacteriota
SpeciesChamaesiphon polymorphus CCALA 037 [PVWO]
Start position on genome 16865
End posion on genome 16777
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagattgccT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGATGGTGGCTGACTCGAAATCAGTTTTAGGGTTACACCTA
ACGGAGGTTCGAATCCTCTCCTCTCCGTat
Downstream region at tRNA end position 
tttttgccta
Secondary structure (Cloverleaf model)
>W2011230163	Ser	CGA
                   T      GTat tttttgccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G C C T       G G A G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TTTAGGGTTACACCTAAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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