The detailed information of tRNA gene sequence


Sequence ID>SRA1042979
Genome IDSRR035092.12106
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 136
End posion on genome 65
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttaattagct
tRNA gene sequence 
GCACGTATCGCCCAATGGTGAGGCAAAGGATTTCAAATCCTTGTGATGTAGGTTCGAATC
CTATTACGTACTgta
Downstream region at tRNA end position 
ggaataaata
Secondary structure (Cloverleaf model)
>SRA1042979	SeC	TCA
                   t      Tgta ggaataaata
                     G - C
                     C   A
                     A - T
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     T A T C C     A
        A A        C      + | | | |     G
      T     C C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T G        A     GTGAT
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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