The detailed information of tRNA gene sequence


Sequence ID>SRA1042988
Genome IDSRR035092.15159
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 420
End posion on genome 496
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgtagtttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGCTAGAGCGCTACACTGGCAGTGTAGAGGTCAAGGGTTCGAC
TCCCTTACGGTCCACCA
Downstream region at tRNA end position 
gcccggagcc
Secondary structure (Cloverleaf model)
>SRA1042988	Ala	GGC
                   t      ACCA gcccggagcc
                     G - C
                     G - C
                     G + T
                     C - G
                     G   G
                     G - C
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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