The detailed information of tRNA gene sequence


Sequence ID>SRA1043228
Genome IDSRR035092.77442
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttttctaT
tRNA gene sequence 
GGGGATGTAGTATAGTTTGGTTTAGTATACGAGGTTTGGGACTTCGTGACCCAGGTTCAA
ATCCTGGCATCCCCATtt
Downstream region at tRNA end position 
aaaatggcaa
Secondary structure (Cloverleaf model)
>SRA1043228	Pro	TGG
                   T      ATtt aaaatggcaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G G T C C     A
    T T G A        A      | | | | |     A
  T         T A T G       C C A G G     C
  G         + | | +                 T T
  G         G T A T
    T T T A        A     TGAC
                    C - G
                    G - C
                    A - T
                    G + T
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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