The detailed information of tRNA gene sequence


Sequence ID>SRA1043249
Genome IDSRR035092.82247
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 255
End posion on genome 335
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctaaatct
tRNA gene sequence 
AGCGGGTTAGAGCAAATTGGTAGCTCGGCAGAATCATAATCTGTGTCATTTGTCTCGGTT
CGAGTCCGAGACCCGCTACTA
Downstream region at tRNA end position 
ttggtagttc
Secondary structure (Cloverleaf model)
>SRA1043249	Met	CAT
                   t      ACTA ttggtagttc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     G A G C C     A
      A A A        A      | | | | |     G
    T       C G A G       C T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     GTCATTTGT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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