The detailed information of tRNA gene sequence


Sequence ID>W2011278893
Genome IDQOCL01000014
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax sp. HLS [QOCL]
Start position on genome 270941
End posion on genome 271017
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattatttaa
tRNA gene sequence 
CGCGGGATGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGGAGGTTCGAA
TCCTTCTCCCGCAACCA
Downstream region at tRNA end position 
atttttctat
Secondary structure (Cloverleaf model)
>W2011278893	fMet	CAT
                   a      ACCA atttttctat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | + | | |     G
    C       C G A G       G G A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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