The detailed information of tRNA gene sequence


Sequence ID>SRA1043405
Genome IDSRR035092.109170
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 160
End posion on genome 85
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcaaagataa
tRNA gene sequence 
GGGGATGTAGCATAGTCTGGTTTAGTGCACCCGGCTGATAACCGGGAGGTCGGCGGTTCA
AATCCGCCCACCCCCAttt
Downstream region at tRNA end position 
aaaactattt
Secondary structure (Cloverleaf model)
>SRA1043405	Ile	GAT
                   a      Attt aaaactattt
                     G - C
                     G - C
                     G - C
                     G - C
                     A   C
                     T - A
                     G - C          T A
                    T     C C G C C     A
    C T G A        A      | | | | |     A
  T         T A C G       G G C G G     C
  G         + | | |                 T T
  G         G T G C
    T T T A        A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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