The detailed information of tRNA gene sequence


Sequence ID>SRA1043419
Genome IDSRR035092.111477
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 264
End posion on genome 175
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaataatatt
tRNA gene sequence 
GGAAGGGTGGCCGAGTCTGGCTTAAGGCTTCTGTTTTGAAAGCAGACGAACCGCAAGGTT
CCGCGGGTTCGAATCCCGCTCCTTCCTCCA
Downstream region at tRNA end position 
ctaaaaggaa
Secondary structure (Cloverleaf model)
>SRA1043419	Ser	TGA
                   t      TCCA ctaaaaggaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G C G G G     C
  G           | | |                 T T
  G         A G G C
    C T T A        T     CGAACCGCAAGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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