The detailed information of tRNA gene sequence


Sequence ID>SRA1043435
Genome IDSRR035092.114693
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 157
End posion on genome 71
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagtttaatt
tRNA gene sequence 
GGAGAGATCCCATAATGGTATCGGAGCGGTTTGCTAAACCGTCGCTGGTAAAACAAGTTC
AGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
taaaatatta
Secondary structure (Cloverleaf model)
>SRA1043435	Ser	GCT
                   t      GCCA taaaatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
        A A        C      | | | | |     G
      T     T A C C       C A G G G     C
      G         | |                 T T
      G     T C G G
        T A        A     CGCTGGTAAAACAAGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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