The detailed information of tRNA gene sequence


Sequence ID>SRA1043461
Genome IDSRR035092.119470
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 69
End posion on genome 158
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caatttaagc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTCGAATGCGGTGGCCTCGAAAGCCATTGTCCGATTTATCGGA
CCGGGGGTTCGAATCCTCTCCCCTCCGCCA
Downstream region at tRNA end position 
gaaaacgcaa
Secondary structure (Cloverleaf model)
>SRA1043461	Ser	CGA
                   c      GCCA gaaaacgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | + | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGATTTATCGGACC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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