The detailed information of tRNA gene sequence


Sequence ID>SRA1043478
Genome IDSRR035092.122082
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 192
End posion on genome 267
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttataataat
tRNA gene sequence 
AGGGATGTAGCCTAGCGGTTTAAGGCACTGGTCTCATACGCCAGGATTTTCGTTGGTTCT
AATCCAACCATCCCACtta
Downstream region at tRNA end position 
tagtaagaac
Secondary structure (Cloverleaf model)
>SRA1043478	Met	CAT
                   t      Ctta tagtaagaac
                     A   A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A A C C     A
      C G A        A      | | | | |     T
    G       T C C G       G T T G G     C
    G       | | | |                 T T
    T       A G G C
      T T A        A     GATTTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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