The detailed information of tRNA gene sequence


Sequence ID>SRA1043482
Genome IDSRR035092.123312
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 130
End posion on genome 43
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattactat
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTTGAAAGGGGCACCCTGCTAAGGTGTTAGATTAGCAATAGTC
TCGGGGGTTCGAACCCCCCTCTCTCCGCac
Downstream region at tRNA end position 
tgaacaaaag
Secondary structure (Cloverleaf model)
>SRA1043482	Ser	GCT
                   t      GCac tgaacaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G G G G G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TAGATTAGCAATAGTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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