The detailed information of tRNA gene sequence


Sequence ID>SRA1043623
Genome IDSRR035092.150390
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 309
End posion on genome 395
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtttaaata
tRNA gene sequence 
GGAGGAGTCGCCTAGTGGTCCATGGCACAGGTTTGCTAAACCTGCGGGCTTTACCGCCCA
CGTGGGTTCAAATCCCACCTCCTCCGCtt
Downstream region at tRNA end position 
ttgattcatg
Secondary structure (Cloverleaf model)
>SRA1043623	Ser	GCT
                   a      GCtt ttgattcatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G T G G G     C
    G         | | |                 T T
    T       T G G C
      C C A        A     CGGGCTTTACCGCCCAC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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