The detailed information of tRNA gene sequence


Sequence ID>SRA1043735
Genome IDSRR035092.167206
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 415
End posion on genome 342
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnttaaa
tRNA gene sequence 
AGGCTCGTAGCTCAGTTGGTAGAGTGCCTGCATGGCATGCAGGAGGTCAGGGGTTCGATC
CCCCTCGGGTCCACac
Downstream region at tRNA end position 
tactttatct
Secondary structure (Cloverleaf model)
>SRA1043735	Ala	GGC
                   a      ACac tactttatct
                     A   C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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