The detailed information of tRNA gene sequence


Sequence ID>W2011327835
Genome IDQXIV01000031
Search identical group
Phylum/ClassUnclassified
SpeciesCaldiserica bacterium SMC4 [QXIV]
Start position on genome 1404
End posion on genome 1328
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagcgaggaa
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTNNGGCTCATAACCCAAAGGTCGACCGTTCAAA
TCGGTCCCCCGCGACCA
Downstream region at tRNA end position 
agcccatgta
Secondary structure (Cloverleaf model)
>W2011327835	fMet	CAT
                   a      ACCA agcccatgta
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G G C     A
      C G A        G      | | | | |     A
    C       C G A G       G A C C G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    N   A
                    N   C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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