The detailed information of tRNA gene sequence


Sequence ID>SRA1043960
Genome IDSRR035092.201843
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 168
End posion on genome 98
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnncttag
tRNA gene sequence 
TGGCCTGTAGTATAATGGTATTACATTTCGTTTGCAACGAGAAGACTTGGGTTCGATTCC
CAGCAGGTCAAtta
Downstream region at tRNA end position 
gaggtatagt
Secondary structure (Cloverleaf model)
>SRA1043960	Ala	TGC
                   g      Atta gaggtatagt
                     T - A
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G A C C C     A
        A A        A      + | | | |     G
      T     T A T G       T T G G G     C
      G       | | |                 T T
      G     T T A C
        T A        A     AGAC
                    T - A
                    T + G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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