The detailed information of tRNA gene sequence


Sequence ID>SRA1044088
Genome IDSRR035092.222448
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 344
End posion on genome 420
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaggaggct
tRNA gene sequence 
GGCCGGATGGCGAAGTTGGCTAACGCGGTGGTCTGCAAAACCATTATGCACGGGTTCGAG
TCCCGTTCCGGCCTCAA
Downstream region at tRNA end position 
gtttgttgtt
Secondary structure (Cloverleaf model)
>SRA1044088	Cys	GCA
                   t      TCAA gtttgttgtt
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G C C C     A
      T G A        G      | | | | |     G
    T       A G C G       A C G G G     C
    G         | | |                 T T
    G       A C G C
      C T A        G     TATGC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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