The detailed information of tRNA gene sequence


Sequence ID>SRA1044116
Genome IDSRR035092.226854
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 18
End posion on genome 110
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatagtat
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGGCACACTGCTAATGTGCTAGAGGAGTTAAATC
CTCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatatggagg
Secondary structure (Cloverleaf model)
>SRA1044116	Ser	GCT
                   t      GCCA aatatggagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGAGGAGTTAAATCCTCTC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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