The detailed information of tRNA gene sequence


Sequence ID>SRA1044224
Genome IDSRR035092.245029
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 138
End posion on genome 224
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaataatat
tRNA gene sequence 
GGTAGGGTGCCAGAATGGTAATCGGAGCTGATTGCTAATCAGTCGGGTGTAATAGCCCTA
TGGGTTCAAATCCCATCCCTACCTCCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1044224	Ser	GCT
                   t      TCCA tnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T A A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G       +   | |                 T T
    T       T C G G
      A A          A     CGGGTGTAATAGCCCT
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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