The detailed information of tRNA gene sequence


Sequence ID>SRA1044241
Genome IDSRR035092.247003
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 395
End posion on genome 321
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnntaa
tRNA gene sequence 
GGACGTAATACTCAATGGTTGGGTGTACGGTTGCAACCCGTACTTTAGCAGGTTCGATTC
CTGCTGCGTCCTCAA
Downstream region at tRNA end position 
gaaattaaat
Secondary structure (Cloverleaf model)
>SRA1044241	Cys	GCA
                   a      TCAA gaaattaaat
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T + G
                     A - T          T T
                    A     C G T C C     A
        A A        T      | | | | |     G
      T     C T C A       G C A G G     C
      G     | + | |                 T T
      G     G G G T
        T T        G     CTTTA
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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